Publications
Publikationen
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Klopfenstein, S. A. I., Sass, J., Vorisek, C. N., Jorczik, F., Schmidt, C. O., Löbe, M., Golebiewski, M., Abaza, H., & Thun, S. (2024). Bringing Communities Together: Mapping the Investigation-Study-Assay-Model (ISA) to Fast Healthcare Interoperability Resources (FHIR). Studies in health technology and informatics, 310, 18–22. https://doi.org/10.3233/SHTI230919
Putzier, M., Khakzad, T., Dreischarf, M. et al. Implementation of cloud computing in the German healthcare system. npj Digit. Med. 7, 12 (2024). https://doi.org/10.1038/s41746-024-01000-3
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How to Assess FAIRness of Your Data – A Summary of Testing Two FAIR Validators
Caroline Stellmach, Michael Rusongoza Muzoora
Volume 310: MEDINFO 2023 — The Future Is Accessible
Bringing Communities Together: Mapping the Investigation-Study-Assay-Model (ISA) to Fast Healthcare Interoperability Resources (FHIR)
Sophie A.I. Klopfenstein, Julian Sass, Carina N. Vorisek, Felix Jorczik, Sylvia Thun, etc. (2023)
Volume 310: MEDINFO 2023 — The Future Is AccessiblePredictive Alarm Prevention by Forecasting Threshold Alarms at the Intensive Care Unit
Sophie A.I. Klopfenstein et al. (2023).
In: Roque, A.C.A., et al. Biomedical Engineering Systems and Technologies. BIOSTEC 2022. Communications in Computer and Information Science, vol 1814. Springer
Use of Terminology Standards to Harmonize COVID-19 Case Report Forms.
Stellmach, C., Thun, S., & Rinaldi, E.
Available at SSRN 4402916.German Medical Data Sciences 2023—Science. Close to People.
Miriam R. Hübner et al. (2023).
German Medical Data Sciences 2023—Science. Close to People.: Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology EV (gmds) 2023 in Heilbronn, Germany (Vol. 307).
IOS Press.Secondary data for global health digitalisation
AF Näher, CN Vorisek, SAI Klopfenstein, M Lehne, S Thun, S Alsalamah, ...
The Lancet Digital Health 5 (2), e93-e101ISO/TS 21564: 2019-based Evaluation of a Semantic Map between Variables in the ISARIC Freestanding Follow Up Survey and ORCHESTRA Studies
E Rinaldi, S Thun, C Stellmach
Journal of Medical Systems 47 (1), 115Towards interoperability in infection control: a standard data model for microbiology
E Rinaldi, C Drenkhahn, B Gebel, K Saleh, H Tönnies, FD von Loewenich, ...
Scientific Data 10 (1), 654Interoperable, Domain-Specific Extensions for the German Corona Consensus (GECCO) COVID-19 Research Data Set Using an Interdisciplinary, Consensus-Based Workflow: Data Set …
G Lichtner, T Haese, S Brose, L Röhrig, L Lysyakova, S Rudolph, M Uebe, ...
JMIR medical informatics 11, e45496Analysis of acute COVID-19 including chronic morbidity: protocol for the deep phenotyping National Pandemic Cohort Network in Germany (NAPKON-HAP)
F Steinbeis, C Thibeault, S Steinbrecher, Y Ahlgrimm, I Haack, D August, Sylvia Thun...
Infection, 1-12Um die Vision eines Krankenhaus-4.0-Modells in Deutschland realisieren zu können, fehlt es im Mo-ment allerdings an der dafür nötigen Infrastruktur, um die Vernetzung und …
C Stellmach, SAI Klopfenstein, S Thun
Das digitale Krankenhaus: Erfordernisse, Handlungsfelder, Umsetzung, 267Artificial Intelligence Bias in Health Care: Web-Based Survey
CN Vorisek, C Stellmach, PJ Mayer, SAI Klopfenstein, DM Bures, A Diehl, ...
Journal of Medical Internet Research 25, e41089Creation of a structured molecular genomics report for Germany as a local adaption of HL7’s Genomic Reporting Implementation Guide
C Stellmach, J Sass, B Auber, M Boeker, T Wienker, AJ Heidel, M Benary, ...
Journal of the American Medical Informatics Association 30 (6), 1179-1189Mapping the SPHN Dataset to FHIR
SAI Klopfenstein, S Thun, K Crameri, C Stellmach
CARING IS SHARING–EXPLOITING THE VALUE IN DATA FOR HEALTH AND INNOVATION, 133Insights into the FAIRness of the German Network University Medicine: A Survey.
L Michaelis, RA Poyraz, MR Muzoora, K Gierend, A Bartschke, ...
CARING IS SHARING–EXPLOITING THE VALUE IN DATA FOR HEALTH AND INNOVATION, 741Secondary data for global health digitalisation
AF Näher, CN Vorisek, SAI Klopfenstein, M Lehne, S Thun, S Alsalamah, ...
The Lancet Digital Health 5 (2), e93-e101Experiences from compiling a FAIR survey in the German Network University Medicine
L Michaelis, RA Poyraz, MR Muzoora, K Gierend, A Bartschke, ...
2023 -
Messung des digitalen Reifegrades von deutschen Krankenhäusern-Status quo und Perspektiven
A Geissler, A Wiesmann, S Thun
Medizinisch Wissenschaftliche VerlagsgesellschaftHow FAIR Is NUM?–Lessons Learnt from a FAIR Survey Within the German Network University Medicine (NUM)
L Michaelis, RA Poyraz, MR Muzoora, K Gierend, A Bartschke, ...
EasyChairDentistry and interoperability
NMR Rajkumar, MR Muzoora, S Thun
Journal of Dental Research 101 (11), 1258-1262The German National Pandemic Cohort Network (NAPKON): rationale, study design and baseline characteristics
M Schons, L Pilgram, JP Reese, M Stecher, G Anton, KS Appel, T Bahmer, ...
European Journal of Epidemiology 37 (8), 849-870Digitalization of health data: interoperability of the proposed European health data space
C Stellmach, MR Muzoora, S Thun
Studies in Health Technology and Informatics 298, 132-136Fast healthcare interoperability resources (FHIR) for interoperability in health research: systematic review
CN Vorisek, M Lehne, SAI Klopfenstein, PJ Mayer, A Bartschke, T Haese, ...
JMIR medical informatics 10 (7), e35724Harmonization and standardization of data for a pan-European cohort on SARS-CoV-2 pandemic
E Rinaldi, C Stellmach, NMR Rajkumar, N Caroccia, C Dellacasa, ...
NPJ Digital Medicine 5 (1), 75The GA4GH Phenopacket schema defines a computable representation of clinical data
JOB Jacobsen, M Baudis, GS Baynam, JS Beckmann, S Beltran, ...
Nature biotechnology 40 (6), 817-820Development of interoperable, domain-specific extensions for the German Corona Consensus (GECCO) COVID-19 research dataset using an interdisciplinary, consensus-based workflow
G Lichtner, T Haese, S Brose, L Röhrig, L Lysyakova, S Rudolph, M Uebe, ...
medRxiv, 2022.05. 12.22274089Erste Ergebnisse des Digitalradar:„Solide “Digitalisierung in den Kliniken
A Hesser
kma-Klinik Management aktuell 27 (04), 26-29Digitalisierung in der Medizin–Weibliche Führungskräfte in der digitalen Medizin: Neue Standards für Digitalisierung und Gleichstellung
A Hohnstein
Gesundheitsökonomie & Qualitätsmanagement 27 (02), 71-73Der GECCO Datensatz für die COVID-19-Forschung
S Thun, C Stellmach, J Saß, A Bartschke
Digitalstrategie im Krankenhaus: Einführung und Umsetzung von Datenkompetenz …Nationale Arena für digitale Medizin: Wandel. Werte. Wege.
ML Dieken
MWVExtending the German Corona Consensus Dataset (GECCO) to the immunization, pediatrics, and cardiology domains (preprint)
G Lichtner, T Haese, S Brose, L Röhrig, L Lysyakova, S Rudolph, M Uebe, ...Implementing SNOMED CT in Open Software Solutions to Enhance the Findability of COVID-19 Questionnaires
CN Vorisek, EA Essenwanger, SAI Klopfenstein, J Sass, J Henke, ...
Challenges of Trustable AI and Added-Value on Health, 649-653The COVID-19 data exchange platform of the German university medicine
HU Prokosch, T Bahls, M Bialke, J Eils, C Fegeler, J Gruendner, ...
Challenges of Trustable AI and Added-Value on Health, 674-678Das AKTIN-Notaufnahmeregister–kontinuierlich aktuelle Daten aus der Akutmedizin: Ergebnisse des Registeraufbaus und erste Datenauswertungen aus 15 Notaufnahmen unter besonderer …
D Brammen, F Greiner, M Kulla, R Otto, W Schirrmeister, S Thun, ...
Medizinische Klinik, Intensivmedizin Und Notfallmedizin 117 (1), 24 -
The GA4GH Phenopacket schema: A computable representation of clinical data for precision medicine
JOB Jacobsen, M Baudis, GS Baynam, JS Beckmann, S Beltran, ...
medRxiv, 2021.11. 27.21266944Towards FAIR Patient Reported Outcome: Application of the Interoperability Principle for Mobile Pandemic Apps
MR Muzoora, M Schaarschmidt, D Krefting, J Oehm, S Riepenhausen, ...
Applying the FAIR Principles to Accelerate Health Research in Europe in the …COVID-19-Forschungsdaten leichter zugänglich machen – Aufbau einer bundesweiten Informationsinfrastruktur
CO Schmidt, J Fluck, M Golebiewski, L Grabenhenrich, H Hahn, T Kirsten, ...
Bundesgesundheitsblatt-Gesundheitsforschung-Gesundheitsschutz 64, 1084-1092NFDI4Health-Nationale Forschungsdateninfrastruktur für personenbezogene Gesundheitsdaten
J Fluck, B Lindstädt, W Ahrens, O Beyan, B Buchner, J Darms, R Depping, ...
Bausteine Forschungsdatenmanagement 2021 (2), 72-85Fast Healthcare Interoperability Resources (FHIR®) Representation of Medication Data Derived from Germand Procedure Classification Codes (OPS) Using Identification of Medicinal Products (IDMP) Compliant Terminology
J Sass, S Zabka, A Essenwanger, J Schepers, M Boeker and S Thun
German Medical Data Sciences: Bringing Data to Life: Proceedings of the …Postcoordination of LOINC Codes in SNOMED CT
R Röhrig
German Medical Data Sciences: Bringing Data to Life: Proceedings of the …Use of LOINC and SNOMED CT with FHIR for microbiology data
E Rinaldi, J Saas, S Thun
Stud Health Technol Inform 278, 156-162Evaluating Suitability of SNOMED CT in Structured Searches for COVID-19 Studies.
CN Vorisek, SAI Klopfenstein, J Sass, M Lehne, CO Schmidt, S Thun
MIE, 88-92German Corona Consensus Datensatz (GECCO): Verbesserter Austausch von Covid-19-Forschungsdaten
S Thun, J Saß, A Bartschke
kma-Klinik Management aktuell 26 (06), 55-56Accessing the ECG data of the apple watch and accomplishing interoperability through FHIR
A Bartschke, Y Börner, S Thun
Stud Health Technol Inform 278, 245-50Mapping from openEHR to FHIR and OMOP CDM to support interoperability for infection control.
E Rinaldi, S Thun
GMS Medizinische Informatik, Biometrie und Epidemiologie 17 (2)Interdisciplinary online hackathons as an approach to combat the COVID-19 pandemic: case study
K Braune, PD Rojas, J Hofferbert, A Valera Sosa, A Lebedev, F Balzer, ...
Journal of medical Internet research 23 (2), e25283Fast Healthcare Interoperability Resources (FHIR) in a FAIR metadata registry for COVID-19 research
SAI Klopfenstein, CN Vorisek, A Shutsko, M Lehne, J Sass, M Löbe, ...
Applying the FAIR Principles to Accelerate Health Research in Europe in the …From OpenEHR to FHIR and OMOP data model for microbiology findings
E Rinaldi, S Thun
Public Health and Informatics, 402-406Fast Healthcare Interoperability Resources (FHIR®) Representation of Medication Data Derived from German Procedure Classification Codes (OPS) Using …
J Sass, S Zabka, A Essenwanger, J Schepers, M Boeker, S Thun
German Medical Data Sciences: Bringing Data to Life, 231-236Motivating Developers to Use Interoperable Standards for Data in Pandemic Health Apps
MR Muzoora, N El-Badawi, C Elsner, A Essenwanger, P Gocke, ...
Public Health and Informatics, 1027-1028Interoperabilität–IT-Standards für telemedizinische Netze
S Thun
Telemedizin: Grundlagen und praktische Anwendung in stationären und …Datenstandards und Interoperabilität
S Thun, SI Klopfenstein, C Stellmach
(Ed.), Digitale Gesundheitsanwendungen (DiGA) (pp. 227-243). Heidelberg: medhochzwei Verlag -
The German Corona Consensus Dataset (GECCO): a standardized dataset for COVID-19 research in university medicine and beyond
J Sass, A Bartschke, M Lehne, A Essenwanger, E Rinaldi, S Rudolph, ...
BMC Medical Informatics and Decision Making 20, 1-7The use of machine learning in rare diseases: a scoping review
J Schaefer, M Lehne, J Schepers, F Prasser, S Thun
Orphanet journal of rare diseases 15, 1-10Digitalisierung, Medizin, Geschlecht: Interdisziplinäre Zugänge
C Czeschik, E Kutzner, F Czerwinski, E Baumann, B Schwarze, I Pidun, ...
Verlag Barbara BudrichTowards interoperability in clinical research-enabling FHIR on the open-source research platform XNAT
M Khvastova, M Witt, A Essenwanger, J Sass, S Thun, D Krefting
Journal of Medical Systems 44, 1-5The German Corona Consensus Dataset (GECCO): a standardized dataset for COVID-19 research
J Sass, A Bartschke, M Lehne, A Essenwanger, E Rinaldi, S Rudolph, ...
medRxiv, 2020.07. 27.20162636Evaluation of current genetic testing reports in German-speaking countries with regard to secondary use and future electronic implementation
TF Radke, SJ Patton, E Pantazoglou, J Sass, S Thun
European Journal of Human Genetics 28 (5), 558-566Dank an die Gutachter von Der Pathologe
A Agaimy, M Anlauf, PDDC August, H Baba, G Baretton, T Barth, ...
Der Pathologe 1, 95A secure multi-party computation protocol for time-to-event analyses
L Vogelsang, M Lehne, P Schoppmann, F Prasser, S Thun, ...
Digital Personalized Health and Medicine, 8-12AKTIN - The German Emergency Department Data Registry – real-time data from emergency medicine : Implementation and first results from 15 emergency departments with focus on Federal Joint Committee's guidelines on acuity assessment
D Brammen, F Greiner, M Kulla, R Otto, W Schirrmeister, S Thun, ...
Med Klin Intensivmed Notfmed. 2020 Dec 21:1-10. German. doi: 10.1007/s00063-020-00764-2. Epub ahead of print. PMID: 33346852; PMCID: PMC7750913. -
Standardizing Germany's electronic disease management program for bronchial asthma
S Julian, A Essenwanger, S Luijten, VOM Paulina
German Medical Data Sciences: Shaping Change-Creative Solutions for …The Use of FHIR in Digital Health-A Review of the Scientific Literature.
M Lehne, S Luijten, PVF genannt Imbusch, S Thun
GMDS, 52-58Why digital medicine depends on interoperability
M Lehne, J Sass, A Essenwanger, J Schepers, S Thun
NPJ digital medicine 2 (1), 79Comparison of the international terminologies SNOMED CT, LOINC and ICD-11: Applicability in a guideline-conform pathology vocabulary for urothelial carcinoma in Germany
F Van Wüllen, TF Radke, E Pantazoglou, G Haroske, S ThunClinical imaging research: higher evidence, global collaboration, improved reporting, and data sharing are the grand challenges
M Dewey, M Bosserdt, JD Dodd, S Thun, HY Kressel
Radiology 291 (3), 547-552Digitale Transformation der Gesundheitswirtschaft: Chancen und Herausforderungen in disruptiven Zeiten
P Asché, B Augurzky, T Berger, A Beß, G Burkhardt, B Calmer, T Dehne, ...
Kohlhammer VerlagGrundlage des Einkaufs 4.0: Interoperabilität von Supply Chain und Medizin durch valide Stammdaten
H Otten, S Thun, A Rathmer
Klinik Einkauf 1 (01), 42-44Quantitative analysis of manual annotation of clinical text samples
JA Miñarro-Giménez, R Cornet, MC Jaulent, H Dewenter, S Thun, ...
International journal of medical informatics 123, 37-48Konzertierte Digitalisierung im Gesundheitswesen
J Schepers, S Thun
Möglichkeiten und Herausforderungen im Kontext der sozialen Sicherung …Towards a Medication Core Data Set for the Medical Informatics Initiative (MII): Initial Mapping Experience between the German Procedure Classification (OPS) and the …
S Zabka, D Ammon, T Ganslandt, JE Gewehr, C Haverkamp, S Kiefer, ...
JOWOWhy digital medicine depends on interoperability. NPJ Digital Medicine, 2, 79
M Lehne, J Sass, A Essenwanger, J Schepers, S ThunASSESS CT Recommendations (2016)
D Kalra, S Schulz, D Karlsson, RV Stichele, R Cornet, KR Gøeg, ...Comparing Two Standardized Value Sets of Infectious Agents: Implications for Semantic Interoperability
J Sass, M Lehne, S Thun
MEDINFO 2019: Health and Wellbeing e-Networks for All, 1574-1575Interoperabilität – Voraussetzung für künstliche Intelligenz und Big Data in der Medizin.
S Thun, M Lehne
E-HEALTH-COM, 1, 47-49Intelligent dank Interoperabilität.
S Thun, M Lehne
das Krankenhaus, 4, 286-287 -
Qualitative analysis of manual annotations of clinical text with SNOMED CT
JA Miñarro-Giménez, C Martínez-Costa, D Karlsson, S Schulz, KR Gøeg
Plos one 13 (12), e0209547ICD-11, ICHI and SNOMED CT—What do the standards mean for eHealth applications?
S Thun, H Dewenter
Bundesgesundheitsblatt-Gesundheitsforschung-Gesundheitsschutz 61, 812-820Data in the clinic and the practice—what is important?
S Thun
Der Gynäkologe 51, 472-478Der Kerndatensatz der Medizininformatik-Initiative: Ein Schritt zur Sekundärnutzung von Versorgungsdaten auf nationaler Ebene
T Ganslandt, M Boeker, M Löbe, F Prasser, J Schepers, SC Semler, ...
Forum der Medizin-Dokumentation und Medizin-Informatik 20 (1), 17ICD-11, ICHI und SNOMED CT–was bedeuten die Systematiken für E-Health-Anwendungen
S Thun, H Dewenter
Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz 61 (7), 812-20Daten in Klinik und Praxis–was ist wichtig
S Thun
Gynäkologe 51 (2)Intercoder reliability of mapping between pharmaceutical dose forms in the German Medication Plan and EDQM Standard Terms
J Sass, K Becker, D Ludmann, E Pantazoglou, H Dewenter, S Thun
Building Continents of Knowledge in Oceans of Data: The Future of Co-Created …Quasi-Monopoly Status of a Non-for-Profit Reference Terminology Provider–An Exemplary Approach on Transparency Improvement Regarding Licensing
H Dewenter, S Thun
Building Continents of Knowledge in Oceans of Data: The Future of Co-Created …